參考文獻 |
1. Chen, C.-C., et al., Interaction modes and approaches to glycopeptide and glycoprotein enrichment. Analyst, 2014. 139(4): p. 688-704.
2. Ji, Y., et al., Efficient enrichment of glycopeptides using metal–organic frameworks by hydrophilic interaction chromatography. Analyst, 2014. 139(19): p. 4987-4993.
3. Xin, F. and P. Radivojac, Post-translational modifications induce significant yet not extreme changes to protein structure. Bioinformatics, 2012. 28(22): p. 2905-2913.
4. Pinho, S.S. and C.A. Reis, Glycosylation in cancer: mechanisms and clinical implications. Nature Reviews Cancer, 2015. 15(9): p. 540.
5. Fuster, M.M. and J.D. Esko, The sweet and sour of cancer: glycans as novel therapeutic targets. Nature Reviews Cancer, 2005. 5(7): p. 526.
6. Bennett, E.P., et al., Control of mucin-type O-glycosylation: a classification of the polypeptide GalNAc-transferase gene family. Glycobiology, 2011. 22(6): p. 736-756.
7. Clausen, H. and E.P. Bennett, A family of UDP-GalNAc: polypeptide N-acetylgalactosaminyl-transferases control the initiation of mucin-type O-linked glycosylation. Glycobiology, 1996. 6(6): p. 635-646.
8. Madera, M., et al., Efficacy of glycoprotein enrichment by microscale lectin affinity chromatography. Journal of separation science, 2008. 31(14): p. 2722-2732.
9. McDonald, C.A., et al., Combining results from lectin affinity chromatography and glycocapture approaches substantially improves the coverage of the glycoproteome. Molecular & Cellular Proteomics, 2009. 8(2): p. 287-301.
10. Ma, C., et al., N?linked glycoproteome profiling of human serum using tandem enrichment and multiple fraction concatenation. Electrophoresis, 2013. 34(16): p. 2440-2450.
11. Chen, J., P. Shah, and H. Zhang, Solid phase extraction of N-linked glycopeptides using hydrazide tip. Analytical chemistry, 2013. 85(22): p. 10670-10674.
12. Malerod, H., et al., Comprehensive profiling of N-linked glycosylation sites in HeLa cells using hydrazide enrichment. Journal of proteome research, 2012. 12(1): p. 248-259.
13. Xu, Y., et al., Highly specific enrichment of glycopeptides using boronic acid-functionalized mesoporous silica. Analytical chemistry, 2008. 81(1): p. 503-508.
14. Matsumura, K., et al., Carbohydrate Binding Specificity of a Fucose-specific Lectin from Aspergillus oryzae A NOVEL PROBE FOR CORE FUCOSE. Journal of Biological Chemistry, 2007. 282(21): p. 15700-15708.
15. Zhang, Y., et al., Mass spectrometry-based N-glycoproteomics for cancer biomarker discovery. Clinical proteomics, 2014. 11(1): p. 18.
16. Wohlgemuth, J., et al., Quantitative site-specific analysis of protein glycosylation by LC-MS using different glycopeptide-enrichment strategies. Analytical biochemistry, 2009. 395(2): p. 178-188.
17. Liu, Y., et al., Synthesis and evaluation of a silica-bonded concanavalin A material for lectin affinity enrichment of N-linked glycoproteins and glycopeptides. Analytical Methods, 2015. 7(1): p. 25-28.
18. Chen, Z., et al., Dynamic evaluation of cell surface N-glycan expression via an electrogenerated chemiluminescence biosensor based on concanavalin A-integrating gold-nanoparticle-modified Ru (bpy) 32+-doped silica nanoprobe. Analytical chemistry, 2013. 85(9): p. 4431-4438.
19. Naismith, J.H. and R.A. Field, Structural basis of trimannoside recognition by concanavalin A. Journal of Biological Chemistry, 1996. 271(2): p. 972-976.
20. Zhao, J., et al., Comparative serum glycoproteomics using lectin selected sialic acid glycoproteins with mass spectrometric analysis: application to pancreatic cancer serum. Journal of proteome research, 2006. 5(7): p. 1792-1802.
21. Zhang, H., et al., Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. Nature biotechnology, 2003. 21(6): p. 660.
22. Nishikaze, T., et al., Reversible hydrazide chemistry-based enrichment for O-GlcNAc-modified peptides and glycopeptides having non-reducing GlcNAc residues. Analyst, 2013. 138(23): p. 7224-7232.
23. Zhang, J. and D.I. Wang, Quantitative analysis and process monitoring of site-specific glycosylation microheterogeneity in recombinant human interferon-γ from Chinese hamster ovary cell culture by hydrophilic interaction chromatography. Journal of Chromatography B: Biomedical Sciences and Applications, 1998. 712(1-2): p. 73-82.
24. Buszewski, B. and S. Noga, Hydrophilic interaction liquid chromatography (HILIC)—a powerful separation technique. Analytical and bioanalytical chemistry, 2012. 402(1): p. 231-247.
25. Yu, L., et al., Hydrophilic interaction chromatography based enrichment of glycopeptides by using click maltose: a matrix with high selectivity and glycosylation heterogeneity coverage. Chemistry–A European Journal, 2009. 15(46): p. 12618-12626.
26. Alpert, A.J., Hydrophilic-interaction chromatography for the separation of peptides, nucleic acids and other polar compounds. Journal of chromatography A, 1990. 499: p. 177-196.
27. Yoshida, T., Peptide separation by hydrophilic-interaction chromatography: a review. Journal of biochemical and biophysical methods, 2004. 60(3): p. 265-280.
28. Boersema, P.J., et al., Evaluation and optimization of ZIC-HILIC-RP as an alternative MudPIT strategy. Journal of proteome research, 2007. 6(3): p. 937-946.
29. Sin, M.-C., S.-H. Chen, and Y. Chang, Hemocompatibility of zwitterionic interfaces and membranes. Polymer journal, 2014. 46(8): p. 436.
30. Villen, J. and S.P. Gygi, The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry. Nature protocols, 2008. 3(10): p. 1630.
31. Humphrey, S.J., D.E. James, and M. Mann, Protein phosphorylation: a major switch mechanism for metabolic regulation. Trends in Endocrinology & Metabolism, 2015. 26(12): p. 676-687.
32. Cohen, P., The role of protein phosphorylation in human health and disease. The FEBS Journal, 2001. 268(19): p. 5001-5010.
33. Shaohui, S., et al., Phosphopeptide enrichment strategy based on strong cation exchange chromatography. Chinese Journal of Chromatography, 2008. 26(2): p. 195-199.
34. Larsen, M.R., et al., Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns. Molecular & cellular proteomics, 2005. 4(7): p. 873-886.
35. Kokubu, M., et al., Specificity of immobilized metal affinity-based IMAC/C18 tip enrichment of phosphopeptides for protein phosphorylation analysis. Analytical chemistry, 2005. 77(16): p. 5144-5154.
36. Tsai, C.-F., et al., Immobilized metal affinity chromatography revisited: pH/acid control toward high selectivity in phosphoproteomics. Journal of proteome research, 2008. 7(9): p. 4058-4069.
37. Matheron, L., et al., Characterization of biases in phosphopeptide enrichment by Ti4+-immobilized metal affinity chromatography and TiO2 using a massive synthetic library and human cell digests. Analytical chemistry, 2014. 86(16): p. 8312-8320.
38. Hennrich, M.L., et al., Ultra acidic strong cation exchange enabling the efficient enrichment of basic phosphopeptides. Analytical chemistry, 2012. 84(4): p. 1804-1808.
39. Lu, A.H., E.e.L. Salabas, and F. Schuth, Magnetic nanoparticles: synthesis, protection, functionalization, and application. Angewandte Chemie International Edition, 2007. 46(8): p. 1222-1244.
40. Zhao, M., et al., Recent advances in the application of core–shell structured magnetic materials for the separation and enrichment of proteins and peptides. Journal of Chromatography A, 2014. 1357: p. 182-193.
41. Chen, C.-T. and Y.-C. Chen, Fe3O4/TiO2 core/shell nanoparticles as affinity probes for the analysis of phosphopeptides using TiO2 surface-assisted laser desorption/ionization mass spectrometry. Analytical chemistry, 2005. 77(18): p. 5912-5919.
42. Zhao, L., et al., The highly selective capture of phosphopeptides by zirconium phosphonate-modified magnetic nanoparticles for phosphoproteome analysis. Journal of the American Society for Mass Spectrometry, 2008. 19(8): p. 1176-1186.
43. Capangpangan, R., et al. Selective enrichment and sensitive detection of candidate disease biomarker using a novel surfactant-coated magnetic nanoparticles. in IOP Conference Series: Materials Science and Engineering. 2014. IOP Publishing.
44. Sun, N., et al., Hydrophilic mesoporous silica materials for highly specific enrichment of N-linked glycopeptide. Analytical chemistry, 2017. 89(3): p. 1764-1771.
45. Yan, J., et al., Selective enrichment of glycopeptides/phosphopeptides using porous titania microspheres. Chemical Communications, 2010. 46(30): p. 5488-5490.
46. Zhang, Y., H. Wang, and H. Lu, Sequential selective enrichment of phosphopeptides and glycopeptides using amine-functionalized magnetic nanoparticles. Molecular BioSystems, 2013. 9(3): p. 492-500.
47. Zou, X., J. Jie, and B. Yang, Single-Step Enrichment of N-Glycopeptides and Phosphopeptides with Novel Multifunctional Ti4+-Immobilized Dendritic Polyglycerol Coated Chitosan Nanomaterials. Analytical chemistry, 2017. 89(14): p. 7520-7526.
48. Han, C.-L., et al., A multiplexed quantitative strategy for membrane proteomics opportunities for mining therapeutic targets for autosomal dominant polycystic kidney disease. Molecular & Cellular Proteomics, 2008. 7(10): p. 1983-1997. |