參考文獻 |
References
[1] New health facility aims to translate stem cell science into therapies | USC News
[2] Mason C., Dunnill, P., A brief definition of regenerative medicine. Regenerative Medicine, 2008. 3(1): p. 1–5.
[3] Confer, D.L., et al, Twenty years of unrelated donor hematopoietic cell transplantation for adult recipients facilitated by the National Marrow Donor Program. Biology of Blood and Marrow Transplantation, 2008. 14 (9 Supplement): p. 8–15.
[4] Malard, F., et al, New Insight for the Diagnosis of Gastrointestinal Acute Graft-versus-Host Disease. Mediators of Inflammation, 2014. Article ID 701013, 9 pages.
[5] Weissman, I.L., et al, Stem and progenitor cells: origins, phenotypes, lineage commitments, and transdifferentiations. Annual Review of Cell and Developmental Biology, 2001. 17: p. 387-403.
[6] Morrison, S.J., et al, Mechanisms of Stem Cell Self-Renewal. Annual Review of Cell and Developmental Biology, 2009. 25: p. 377-406.
[7] What are the unique properties of all stem cells? In Stem Cell Information [World Wide Web site]. Bethesda, MD: National Institutes of Health, U.S. Department of Health and Human Services, 2015.
[8] Mitalipov, S., et al, Totipotency, pluripotency and nuclear reprogramming. Advances in Biochemical Engineering & Biotechnology, 2009. 114: p. 185–99.
[9] Binder, Marc D.; Hirokawa, Nobutaka; Uwe Windhorst, eds. (2009). Encyclopedia of neuroscience. Berlin: Springer. ISBN 978-3540237358
[10] Tallone T., et al, Adult human adipose tissue contains several types of multipotent cells. Journal of Cardiovascular Translational Research, 2011. 4 (2): p. 200–10.
[11] Hans RS. The potential of stem cells: An inventory. In: Knoepffler N, Schipanski D, Sorgner SL, editors. Human biotechnology as Social Challenge. England: Ashgate Publishing, Ltd; 2007. p. 28.
[12] http://gowiki.tamu.edu/wiki/index.php/Category:GO:0061017_!_hepatoblast_differentiation
[13] Reya, T., et al., Stem cells, cancer, and cancer stem cells. Nature, 2001. 414(6859): p. 105-111.
[14] Fauza, D., Amniotic fluid and placental stem cells. Best Practice & Research in Clinical Obstetrics & Gynaecology, 2004. 18(6): p. 877-891.
[15] Kolambkar, Y.M., et al., Chondrogenic differentiation of amniotic fluid-derived stem cells. Journal of Molecular Histology, 2007. 38(5): p. 405-413.
[16] De Coppi, P., et al., Isolation of amniotic stem cell lines with potential for therapy. Nature Biotechnology, 2007. 25(1): p. 100-106.
[17] Zheng, Y.-B., et al., Characterization and hepatogenic differentiation of mesenchymal stem cells from human amniotic fluid and human bone marrow: A comparative study. Cell Biology International, 2008. 32(11): p. 1439-1448.
[18] Tsai, M.-S., et al., Functional network analysis of the transcriptomes of mesenchymal stem cells derived from amniotic fluid, amniotic membrane, cord blood, and bone marrow. Stem Cells, 2007. 25(10): p. 2511-2523.
[19] Kim, J., et al., Human amniotic fluid-derived stem cells have characteristics of multipotent stem cells. Cell Proliferation, 2007. 40(1): p. 75-90.
[20] Battula, V.L., et al., Human placenta and bone marrow derived MSC cultured in serum-free, b-FGF-containing medium express cell surface frizzled-9 and SSEA-4 and give rise to multilinelage differentiation. Differentiation, 2007. 75(4): p. 279-291.
[21] Tsai, M.S., et al., Clonal amniotic fluid-derived stem cells express characteristics of both mesenchymal and neural stem cells. Biology of Reproduction, 2006. 74(3): p. 545-551.
[22] Poloni, A., et al., Characterization and expansion of mesenchymal progenitor cells from first-trimester chorionic villi of human placenta. Cytotherapy, 2008. 10(7): p. 690-697.
[23] Gucciardo, L., et al., Fetal mesenchymal stem cells: isolation, properties and potential use in perinatology and regenerative medicine. Bjog-an International Journal of Obstetrics and Gynaecology, 2009. 116(2): p. 166-172
[24] Klimanskaya, I., et al., Human embryonic stem cells derived without feeder cells. Lancet, 2005. 365(9471): p. 1636-1641.
[25] Higuchi, A., et al., Biomaterials for the Feeder-Free Culture of Human Embryonic Stem Cells and Induced Pluripotent Stem Cells. Chemical Reviews, 2011. 111(5): p. 3021-3035.
[26] Okita, K., T. Ichisaka, and S. Yamanaka, Generation of germline-competent induced pluripotent stem cells. Nature, 2007. 448(7151): p. 313-7.
[27] 20. Takahashi, K. and S. Yamanaka, Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell, 2006. 126(4): p. 663-676.
[28] Lin, S.-L., et al., Mir-302 reprograms human skin cancer cells into a pluripotent ES-cell-like state. Rna-a Publication of the Rna Society, 2008. 14(10): p. 2115-2124.
[29] Zhou, H., et al., Generation of Induced Pluripotent Stem Cells Using Recombinant Proteins (vol 4, pg 381, 2009). Cell Stem Cell, 2009. 4(6): p. 581-581
[30] Higuchi, A., et al., Biomimetic Cell Culture Proteins as Extracellular Matrices for Stem Cell Differentiation. Chemical Reviews, 2012. 112(8): p. 4507-4540.
[31] Meissner, A., et al, Induced pluripotent stem cells: current progress and potential for regenerative medicine. Trends in Molecular Medicine, 2009. 15(2): p. 59–68
[32] What are adult stem cells? In Stem Cell Information [World Wide Web site]. Bethesda, MD: National Institutes of Health, U.S. Department of Health and Human Services, 2015.
[33] Brighton, C.T. and R.M. Hunt, EARLY HISTOLOGICAL AND ULTRASTRUCTURAL-CHANGES IN MEDULLARY FRACTURE CALLUS. Journal of Bone and Joint Surgery-American Volume, 1991. 73A (6): p. 832-847.
[34] Chamberlain, G., et al., Concise review: Mesenchymal stem cells: Their phenotype, differentiation capacity, immunological features, and potential for homing. Stem Cells, 2007. 25(11): p. 2739-2749.
[35] Modena, A.B., Amniotic fluid dynamics. Acta Biomedica, 2004. 75(suppl): p. 11–13.
[36] Beall, M.H., Amniotic fluid dynamics. Placenta, 2007. 28: p. 816–823.
[37] Gosden, C.M., Amniotic fluid cell types and culture. British Medical Bulletin, 1983. 39(4): p. 348-354.
[38] Hoehn, H. and D. Salk, Morphological and biochemical heterogeneity of amniotic fluid cells in culture, in Methods in Cell Biology, A.L. Samuel and J.D. Gretchen, Editors. 1982. p. 11-34.
[39] http://www.health.harvard.edu/diagnostic-tests/amniosentesis.htm
[40] Ronnee K. Yashon; Michael R. Cummings (23 September 2011). Human Genetics and Society. Cengage Learning. p. 83. ISBN 978-0-538-73321-2.
[41] Tsai, M.S., et al., Isolation of human multipotent mesenchymal stem cells from second-trimester amniotic fluid using a novel two-stage culture protocol. Human Reproduction, 2004. 19(6): p. 1450-1456.
[42] Jiang, Y.H., et al., Pluripotency of mesenchymal stem cells derived from adult marrow. Nature, 2002. 418(6893): p. 41-49.
[43] Perrone, L., et al., Postnatal weight change is influenced by mother-newborn pair leptin levels. Nutrition Research, 2000. 20(11): p. 1531-1536.
[44] Zambotti, F., et al., Monoamine metabolites and related compounds in human amniotic fluid: Assay by gas chromatography and gas chromatography-mass spectrometry. Clinica Chimica Acta 1975. 61(3): p. 247-256.
[45] Barry, F.P., et al., The monoclonal antibody SH-2, raised against human mesenchymal stem cells, recognizes an epitope on endoglin (CD105). Biochemical and Biophysical Research Communications, 1999. 265(1): p. 134-139.
[46] Barry, F., et al., The SH-3 and SH-4 antibodies recognize distinct epitopes on CD73 from human mesenchymal stem cells. Biochemical and Biophysical Research Communications, 2001. 289(2): p. 519-524.
[47] Baksh, D., L. Song, and R.S. Tuan, Adult mesenchymal stem cells: characterization, differentiation, and application in cell and gene therapy. Journal of Cellular and Molecular Medicine, 2004. 8(3): p. 301-316.
[48] Ririe, K.M., R.P. Rasmussen, and C.T. Wittwer, Product differentiation by analysis of DNA melting curves during the polymerase chain reaction. Analytical Biochemistry, 1997. 245(2): p. 154-160.
[49] Shamblott, M.J., et al., Human embryonic germ cell derivatives express a broad range of developmentally distinct markers and proliferate extensively in vitro. Proceedings of the National Academy of Sciences of the United States of America, 2001. 98(1): p. 113-118.
[50] Pittenger, M.F., et al., Multilineage potential of adult human mesenchymal stem cells. Science, 1999. 284(5411): p. 143-147.
[51] Zuk, P.A., et al., Human adipose tissue is a source of multipotent stem cells. Molecular Biology of the Cell, 2002. 13(12): p. 4279-4295.
[52] Engler, A.J., et al., Matrix elasticity directs stem cell lineage specification. Cell, 2006. 126(4): p. 677-689.
[53] Higuchi, A., et al., Physical Cues of Biomaterials Guide Stem Cell Differentiation Fate. Chemical Reviews, 2013. 113(5): p. 3297-3328.
[54] Salasznyk, R.M., et al., Adhesion to vitronectin and collagen I promotes osteogenic differentiation of human mesenchymal stem cells. Journal of Biomedicine and Biotechnology, 2004(1): p. 24-34.
[55] Hashimoto, J., Y. Kariya, and K. Miyazaki, Regulation of proliferation and chondrogenic differentiation of human mesenchymal stem cells by laminin-5 (laminin-332). Stem Cells, 2006. 24(11): p. 2346-2354.
[56] Chastain, S.R., et al., Adhesion of mesenchymal stem cells to polymer scaffolds occurs via distinct ECM ligands and controls their osteogenic differentiation. Journal of Biomedical Materials Research Part A, 2006. 78A(1): p. 73-85.
[57] Suzuki, S., et al., Effects of Extracellular Matrix on Differentiation of Human Bone Marrow-Derived Mesenchymal Stem Cells into Smooth Muscle Cell Lineage: Utility for Cardiovascular Tissue Engineering. Cells Tissues Organs, 2010. 191(4): p. 269-280.
[58] van Dijk, A., et al., Differentiation of human adipose-derived stem cells towards cardiomyocytes is facilitated by laminin. Cell and Tissue Research, 2008. 334(3): p. 457-467.
[59] Mruthyunjaya, S., et al., Laminin-1 induces neurite outgrowth in human mesenchymal stem cells in serum/differentiation factors-free conditions through activation of FAK-MEK/ERK signaling pathways. Biochemical and Biophysical Research Communications, 2010. 391(1): p. 43-48.
[60] Delcroix, G.J.R., et al., The therapeutic potential of human multipotent mesenchymal stromal cells combined with pharmacologically active microcarriers transplanted in hemi-parkinsonian rats. Biomaterials, 2011. 32(6): p. 1560-1573.
[61] Levenberg, S., et al., Differentiation of human embryonic stem cells on three-dimensional polymer scaffolds. Proceedings of the National Academy of Sciences of the United States of America, 2003. 100(22): p. 12741-12746.
[62] Park, I.-S., et al., The correlation between human adipose-derived stem cells differentiation and cell adhesion mechanism. Biomaterials, 2009. 30(36): p. 6835-6843.
[63] Ter Brugge, P.J. and J.A. Jansen, In vitro osteogenic differentiation of rat bone marrow cells subcultured with and without dexamethasone. Tissue Engineering, 2002. 8(2): p. 321-331.
[64] Park, J.S., et al., The effect of matrix stiffness on the differentiation of mesenchymal stem cells in response to TGF-beta. Biomaterials, 2011. 32(16): p. 3921-3930.
[65] Bhandari, D.R., et al., The simplest method for in vitro beta-cell production from human adult stem cells. Differentiation, 2011. 82(3): p. 144-152.
[66] Xie, Q.-P., et al., Human bone marrow mesenchymal stem cells differentiate into insulin-producing cells upon microenvironmental manipulation in vitro. Differentiation, 2009. 77(5): p. 483-491.
[67] Gabr, M.M., et al., Generation of Insulin-Producing Cells from Human Bone Marrow-Derived Mesenchymal Stem Cells: Comparison of Three Differentiation Protocols. Biomed Research International, 2014.
[68] Czubak, P., et al., A Modified Method of Insulin Producing Cells′ Generation from Bone Marrow-Derived Mesenchymal Stem Cells. Journal of Diabetes Research, 2014.
[69] Cooper, G.M., The Cell: A Molecular Approach. 2000-2013.
[70] Gilbert, P.M., et al., Substrate Elasticity Regulates Skeletal Muscle Stem Cell Self-Renewal in Culture. Science, 2010. 329(5995): p. 1078-1081.
[71] Georges, P.C., et al., Matrices with compliance comparable to that of brain tissue select neuronal over glial growth in mixed cortical cultures. Biophysical Journal, 2006. 90(8): p. 3012-3018.
[72] Flanagan, L.A., et al., Neurite branching on deformable substrates. Neuroreport, 2002. 13(18): p. 2411-2415.
[73] Hofstetter, C.P., et al., Marrow stromal cells form guiding strands in the injured spinal cord and promote recovery. Proceedings of the National Academy of Sciences of the United States of America, 2002. 99(4): p. 2199-2204.
[74] Kondo, T., et al., Sonic hedgehog and retinoic acid synergistically promote sensory fate specification from bone marrow-derived pluripotent stem cells. Proceedings of the National Academy of Sciences of the United States of America, 2005. 102(13): p. 4789-4794.
[75] Engler, A.J., et al., Myotubes differentiate optimally on substrates with tissue-like stiffness: pathological implications for soft or stiff microenvironments. Journal of Cell Biology, 2004. 166(6): p. 877-887.
[76] Ferrari, G., et al., Muscle regeneration by bone marrow derived myogenic progenitors. Science, 1998. 279(5356): p. 1528-1530.
[77] Andrades, J.A., et al., Selection and amplification of a bone marrow cell population and its induction to the chondro-osteogenic lineage by rhOP-1: an in vitro and in vivo study. International Journal of Developmental Biology, 2001. 45(4): p. 689-693.
[78] Holmbeck, K., et al., MT1-MMP-deficient mice develop dwarfism, osteopenia, arthritis, and connective tissue disease due to inadequate collagen turnover. Cell, 1999. 99(1): p. 81-92.
[79] Morinobu, M., et al., Osteopontin expression in osteoblasts and osteocytes during bone formation under mechanical stress in the calvarial suture in vivo. Journal of Bone and Mineral Research, 2003. 18(9): p. 1706-1715.
[80] Deng, J., et al., Mesenchymal stem cells spontaneously express neural proteins in culture and are neurogenic after transplantation. Stem Cells, 2006. 24(4): p. 1054-1064.
[81] McBeath, R., et al., Cell shape, cytoskeletal tension, and RhoA regulate stem cell lineage commitment. Developmental Cell, 2004. 6(4): p. 483-495.
[82] LaIuppa, J.A., et al., Culture materials affect ex vivo expansion of hematopoietic progenitor cells. Journal of Biomedical Materials Research, 1997. 36(3): p. 347-359.
[83] Seraj, M.J., et al., Functional evidence for a novel human breast carcinoma metastasis suppressor, BRMS1, encoded at chromosome 11q13. Cancer Research, 2000. 60(11): p. 2764-2769.
[84] Lu, Z., et al., Collagen Type II Enhances Chondrogenesis in Adipose Tissue-Derived Stem Cells by Affecting Cell Shape. Tissue Engineering Part A, 2010. 16(1): p. 81-90.
[85] Kikkawa, Y., et al., Integrin binding specificity of laminin-10/11 : laminin-10/11 are recognized by alpha 3 beta 1, alpha 6 beta 1 and alpha 6 beta 4 integrins. Journal of Cell Science, 2000. 113(5): p. 869-876.
[86] Jiang, X.S., et al., Surface-immobilization of adhesion peptides on substrate for ex vivo expansion of cryopreserved umbilical cord blood CD34(+) cells. Biomaterials, 2006. 27(13): p. 2723-2732.
[87] Gelain, F., et al., Designer Self-Assembling Peptide Nanofiber Scaffolds for Adult Mouse Neural Stem Cell 3-Dimensional Cultures. Plos One, 2006. 1(2).
[88] Frontiers in tissue engineering. 1998.
[89] Rosso, F., et al., From cell-ECM interactions to tissue engineering. Journal of Cellular Physiology, 2004. 199(2): p. 174-180.
[90] Langer, R. and J.P. Vacanti, Tissue engineering. Science, 1993. 260(5110): p. 920-926.
[91] Barbucci, R., Integrated Biomaterials Science. 2002.
[92] Putnam, A.J. and D.J. Mooney, Tissue engineering using synthetic extracellular matrices. Nature Medicine, 1996. 2(7): p. 824-826.
[93] Daley, W.P., S.B. Peters, and M. Larsen, Extracellular matrix dynamics in development and regenerative medicine. Journal of Cell Science, 2008. 121(3): p. 255-264.
[94] Rozario, T. and D.W. DeSimone, The extracellular matrix in development and morphogenesis: A dynamic view. Developmental Biology, 2010. 341(1): p. 126-140.
[95] Chen, L.-Y., et al., Effect of the surface density of nanosegments immobilized on culture dishes on ex vivo expansion of hematopoietic stem and progenitor cells from umbilical cord blood. Acta Biomaterialia, 2012. 8(5): p. 1749-1758.
[96] Koivunen, E., B.C. Wang, and E. Ruoslahti, Phage Libraries Displaying Cyclic Peptides with Different Ring Sizes: Ligand Specificities of the RGD-Directed Integrins. Bio-Technology, 1995. 13(3): p. 265-270.
[97] Kolhar, P., et al., Synthetic surfaces for human embryonic stem cell culture. Journal of Biotechnology, 2010. 146(3): p. 143-146.
[98] Klim, J.R., et al., A defined glycosaminoglycan-binding substratum for human pluripotent stem cells. Nature Methods, 2010. 7(12): p. 989-994.
[99] Rosso, F., et al., Smart materials as scaffolds for tissue engineering. Journal of Cellular Physiology, 2005. 203(3): p. 465-470.
[100] Moroni, L., J.R. De Wijn, and C.A. Van Blitterswijk, Integrating novel technologies to fabricate smart scaffolds. Journal of Biomaterials Science-Polymer Edition, 2008. 19(5): p. 543-572.
[101] Mano, J.F., et al., Natural origin biodegradable systems in tissue engineering and regenerative medicine: present status and some moving trends. Journal of the Royal Society Interface, 2007. 4(17): p. 999-1030.
[102] Lee, C.H., A. Singla, and Y. Lee, Biomedical applications of collagen. International Journal of Pharmaceutics, 2001. 221(1-2): p. 1-22.
[103] Pankov, R. and K.M. Yamada, Fibronectin at a glance. Journal of Cell Science, 2002. 115(20): p. 3861-3863.
[104] Mao, Y. and J.E. Schwarzbauer, Fibronectin fibrillogenesis, a cell-mediated matrix assembly process. Matrix Biology, 2005. 24(6): p. 389-399.
[105] http://www.sigmaaldrich.com/catalog/product/sigma/V8379?lang=en®ion=TW.
[106] Ogawa, T., et al., The short arm of laminin gamma 2 chain of laminin-5 (laminin-332) binds syndecan-1 and regulates cellular adhesion and migration by suppressing phosphorylation of integrin beta 4 chain. Molecular Biology of the Cell, 2007. 18(5): p. 1621-1633.
[107] Klees, R.F., et al., Laminin-5 induces osteogenic gene expression in human mesenchymal stem cells through an ERK-dependent pathway. Molecular Biology of the Cell, 2005. 16(2): p. 881-890.
[108] Ma, W., et al., Cell-extracellular matrix interactions regulate neural differentiation of human embryonic stem cells. Bmc Developmental Biology, 2008. 8.
[109] Tate, C.C., et al., Laminin and fibronectin scaffolds enhance neural stem cell transplantation into the injured brain. Journal of Tissue Engineering and Regenerative Medicine, 2009. 3(3): p. 208-217.
[110] Hayman, M.W., et al., Growth of human stem cell-derived neurons on solid three-dimensional polymers. Journal of Biochemical and Biophysical Methods, 2005. 62(3): p. 231-240.
[111] Martinez-Ramos, C., et al., Differentiation of postnatal neural stem cells into glia and functional neurons on laminin-coated polymeric substrates. Tissue Engineering Part A, 2008. 14(8): p. 1365-1375.
[112] Li, S., et al., Matrix assembly, regulation, and survival functions of laminin and its receptors in embryonic stem cell differentiation. Journal of Cell Biology, 2002. 157(7): p. 1279-1290.
[113] Hall, P.E., et al., Laminin enhances the growth of human neural stem cells in defined culture media. Bmc Neuroscience, 2008. 9.
[114] Delcroix, G.J.R., et al., Adult cell therapy for brain neuronal damages and the role of tissue engineering. Biomaterials, 2010. 31(8): p. 2105-2120.
[115] Kleinman, H.K. and G.R. Martin, Matrigel: Basement membrane matrix with biological activity. Seminars in Cancer Biology, 2005. 15(5): p. 378-386.
[116] Haque, A., et al., The effect of recombinant E-cadherin substratum on the differentiation of endoderm-derived hepatocyte-like cells from embryonic stem cells. Biomaterials, 2011. 32(8): p. 2032-2042.
[117] Kaur, G., et al., The promotion of osteoblastic differentiation of rat bone marrow stromal cells by a polyvalent plant mosaic virus. Biomaterials, 2008. 29(30): p. 4074-4081.
[118] Yue, X.-S., et al., A fusion protein N-cadherin-Fc as an artificial extracellular matrix surface for maintenance of stem cell features. Biomaterials, 2010. 31(20): p. 5287-5296.
[119] Shi, C., et al., Stem-cell-capturing collagen scaffold promotes cardiac tissue regeneration. Biomaterials, 2011. 32(10): p. 2508-2515.
[120] Lee, H.J., et al., Enhanced Chondrogenesis of Mesenchymal Stem Cells in Collagen Mimetic Peptide-Mediated Microenvironment. Tissue Engineering Part A, 2008. 14(11): p. 1843-1851.
[121] You, M., et al., Chondrogenic differentiation of human bone marrow mesenchymal stem cells on polyhydroxyalkanoate (PHA) scaffolds coated with PHA granule binding protein PhaP fused with RGD peptide. Biomaterials, 2011. 32(9): p. 2305-2313.
[122] Hennessy, K.M., et al., The effect of collagen I mimetic peptides on mesenchymal stem cell adhesion and differentiation, and on bone formation at hydroxyapatite surfaces. Biomaterials, 2009. 30(10): p. 1898-1909.
[123] Yang, F., et al., The effect of incorporating RGD adhesive peptide in polyethylene glycol diacrylate hydrogel on osteogenesis of bone marrow stromal cells. Biomaterials, 2005. 26(30): p. 5991-5998.
[124] Nguyen, L.H., et al., Unique biomaterial compositions direct bone marrow stem cells into specific chondrocytic phenotypes corresponding to the various zones of articular cartilage. Biomaterials, 2011. 32(5): p. 1327-1338.
[125] Betre, H., et al., Chondrocytic differentiation of human adipose-derived adult stem cells in elastin-like polypeptide. Biomaterials, 2006. 27(1): p. 91-99.
[126] Meinel, L., et al., Engineering bone-like tissue in vitro using human bone marrow stem cells and silk scaffolds. Journal of Biomedical Materials Research Part A, 2004. 71A(1): p. 25-34.
[127] Santiago, L.Y., et al., Peptide-surface modification of poly(caprolactone) with laminin-derived sequences for adipose-derived stem cell applications. Biomaterials, 2006. 27(15): p. 2962-2969.
[128] Wojtowicz, A.M., et al., Coating of biomaterial scaffolds with the collagen-mimetic peptide GFOGER for bone defect repair. Biomaterials, 2010. 31(9): p. 2574-2582.
[129] Cooke, M.J., et al., Neural differentiation regulated by biomimetic surfaces presenting motifs of extracellular matrix proteins. Journal of Biomedical Materials Research Part A, 2010. 93A(3): p. 824-832.
[130] Anderson, J.M., et al., Osteogenic Differentiation of Human Mesenchymal Stem Cells Directed by Extracellular Matrix-Mimicking Ligands in a Biomimetic Self-Assembled Peptide Amphiphile Nanomatrix. Biomacromolecules, 2009. 10(10): p. 2935-2944.
[131] Bhatnagar, R.S., J.J. Qian, and C.A. Gough, The role in cell binding of a beta-bend within the triple helical region in collagen alpha 1(I) chain: Structural and biological evidence for conformational tautomerism on fiber surface. Journal of Biomolecular Structure & Dynamics, 1997. 14(5): p. 547-60.
[132] Higuchi, A., et al., Polymeric Materials for Ex vivo Expansion of Hematopoietic Progenitor and Stem Cells. Polymer Reviews, 2009. 49(3): p. 181-200.
[133] Melkoumian, Z., et al., Synthetic peptide-acrylate surfaces for long-term self-renewal and cardiomyocyte differentiation of human embryonic stem cells. Nature Biotechnology, 2010. 28(6): p. 606-610.
[134] Pierschbacher, M.D. and E. Ruoslahti, Cell attachment activity of fibronectin can be duplicated by small synthetic fragments of the molecule. Nature, 1984. 309(5963): p. 30-33.
[135] Suzuki, S., et al., Complete amino acid sequence of human vitronectin deduced from cDNA. Similarity of cell attachment sites in vitronectin and fibronectin. The Embo Journal, 1985. 4(10): p. 2519-2524.
[136] Oldberg, A., A. Franzén, and D. Heinegård, The primary structure of a cell-binding bone sialoprotein. The Journal of Biological Chemistry, 1988. 263(36): p. 19430-19432.
[137] Scadden, D.T., The stem-cell niche as an entity of action. Nature, 2006. 441(7097): p. 1075-1079.
[138] Nilsson, S.K., et al., Osteopontin, a key component of the hematopoietic stem cell niche and regulator of primitive hematopoietic progenitor cells. Blood, 2005. 106(4): p. 1232-1239.
[139] Moore, K.A. and I.R. Lemischka, Stem cells and their niches. Science, 2006. 311(5769): p. 1880-1885.
[140] Schofield, R., The relationship between the spleen colony-forming cell and the haemopoietic stem cell. Blood Cells, 1978. 4(1-2): p. 7-25.
[141] Li, L.H. and T. Xie, Stem cell niche: Structure and function, in Annual Review of Cell and Developmental Biology. 2005. p. 605-631.
[142] Jensen, U.B., S. Lowell, and F.M. Watt, The spatial relationship between stem cells and their progeny in the basal layer of human epidermis: a new view based on whole-mount labelling and lineage analysis. Development, 1999. 126(11): p. 2409-2418.
[143] Nuttelman, C.R., M.C. Tripodi, and K.S. Anseth, Synthetic hydrogel niches that promote hMSC viability. Matrix Biology, 2005. 24(3): p. 208-218.
[144] Feng, Q., et al., Expansion of engrafting human hematopoietic stem/progenitor cells in three-dimensional scaffolds with surface-immobilized fibronectin. Journal of Biomedical Materials Research Part A, 2006. 78A(4): p. 781-791.
[145] Gerecht, S., et al., Hyaluronic acid hydrogen for controlled self-renewal and differentiation of human embryonic stem cells. Proceedings of the National Academy of Sciences of the United States of America, 2007. 104(27): p. 11298-11303.
[146] Chang, C.-F., et al., Three-dimensional collagen fiber remodeling by mesenchymal stem cells requires the integrin-matrix interaction. Journal of Biomedical Materials Research Part A, 2007. 80A(2): p. 466-474.
[147] Bellamkonda, R., et al., Laminin Oligopeptide Derivatized Agarose Gels Allow Three-Dimensional Neurite Extension In Vitro. Journal of Neuroscience Research, 1995. 41: p. 501-509.
[148] Olsen, B.R., A.M. Reginato, and W.F. Wang, Bone development. Annual Review of Cell and Developmental Biology, 2000. 16: p. 191-220.
[149] Harada, S. and G.A. Rodan, Control of osteoblast function and regulation of bone mass. Nature, 2003. 423(6937): p. 349-355.
[150] Lian, J.B., et al., Networks and hubs for the transcriptional control of osteoblastogenesis. Reviews in Endocrine & Metabolic Disorders, 2006. 7(1-2): p. 1-16.
[151] Ducy, P., et al., Osf2/Cbfa1: A transcriptional activator of osteoblast differentiation. Cell, 1997. 89(5): p. 747-754.
[152] Lengner, C.J., et al., Activation of the bone-related Runx2/Cbfa1 promoter in mesenchymal condensations and developing chondrocytes of the axial skeleton. Mechanisms of Development, 2002. 114(1-2): p. 167-170.
[153] Romero-Prado, M., et al., Functional characterization of human mesenchymal stem cells that maintain osteochondral fates. Journal of Cellular Biochemistry, 2006. 98(6): p. 1457-1470.
[154] Murtaugh, L.C., et al., The chick transcriptional repressor Nkx3.2 acts downstream of Shh to promote BMP-Dependent axial chondrogenesis. Developmental Cell, 2001. 1(3): p. 411-422.
[155] Iwamoto, M., et al., Runx2 expression and action in chondrocytes are regulated by retinoid signaling and parathyroid hormone-related peptide (PTHrP). Osteoarthritis and Cartilage, 2003. 11(1): p. 6-15.
[156] Eames, B.F., P.T. Sharpe, and J.A. Helms, Hierarchy revealed in the specification of three skeletal fates by Sox9 and Runx2. Developmental Biology, 2004. 274(1): p. 188-200.
[157] Lengner, C.J., et al., Nkx3.2-mediated repression of Runx2 promotes chondrogenic differentiation. Journal of Biological Chemistry, 2005. 280(16): p. 15872-15879.
[158] Guo, J., et al., PTH/PTHrP receptor delays chondrocyte hypertrophy via both Runx2-dependent and -independent pathways. Developmental Biology, 2006. 292(1): p. 116-128.
[159] Provot, S., et al., Nkx3.2/Bapx1 acts as a negative regulator of chondrocyte maturation. Development, 2006. 133(4): p. 651-662.
[160] Li, T.F., et al., Parathyroid hormone-related peptide (PTHrP) inhibits Runx2 expression through the PKA signaling pathway. Experimental Cell Research, 2004. 299(1): p. 128-136.
[161] Zelzer, E., et al., Tissue specific regulation of VEGF expression during bone development requires Cbfa1/Runx2. Mechanisms of Development, 2001. 106(1-2): p. 97-106.
[162] Pratap, J., et al., The Runx2 osteogenic transcription factor regulates matrix metalloproteinase 9 in bone metastatic cancer cells and controls cell invasion. Molecular and Cellular Biology, 2005. 25(19): p. 8581-8591.
[163] ten Dijke, P., et al., Signal transduction of bone morphogenetic proteins in osteoblast differentiation. Journal of Bone and Joint Surgery-American Volume, 2003. 85A: p. 34-38.
[164] Chen, D., M. Zhao, and G.R. Mundy, Bone morphogenetic proteins. Growth Factors, 2004. 22(4): p. 233-241.
[165] Bidder, M., T. Latifi, and D.A. Towler, Reciprocal temporospatial patterns of Msx2 and osteocalcin gene expression during murine odontogenesis. Journal of Bone and Mineral Research, 1998. 13(4): p. 609-619.
[166] Ferrari, D., et al., Dlx-5 in limb initiation in the chick embryo. Developmental Dynamics, 1999. 216(1): p. 10-15.
[167] Holleville, N., et al., BMP signals regulate Dlx5 during early avian skull development. Developmental Biology, 2003. 257(1): p. 177-189.
[168] Hassan, M.Q., et al., Dlx3 transcriptional regulation of osteoblast differentiation: Temporal recruitment of Msx2 Dlx3 an Dlx5 homeodomain proteins to chromatin of the osteocalcin gene. Molecular and Cellular Biology, 2004. 24(20): p. 9248-9261.
[169] Depew, M.J., et al., Reassessing the Dlx code: the genetic regulation of branchial arch skeletal pattern and development. Journal of Anatomy, 2005. 207(5): p. 501-561.
[170] Dodig, M., et al., Ectopic Msx2 overexpression inhibits and Msx2 antisense stimulates calvarial osteoblast differentiation. Developmental Biology, 1999. 209(2): p. 298-307.
[171] Lee, M.H., et al., BMP-2-induced Runx2 expression is mediated by Dlx5, and TGF-beta 1 opposes the BMP-2-induced osteoblast differentiation by suppression of Dlx5 expression. Journal of Biological Chemistry, 2003. 278(36): p. 34387-34394.
[172] Lee, M.H., et al., BMP-2-induced Osterix expression is mediated by Dlx5 but is independent of Runx2. Biochemical and Biophysical Research Communications, 2003. 309(3): p. 689-694.
[173] Cheng, S.L., et al., Msx2 promotes osteogenesis and suppresses adipogenic differentiation of multipotent mesenchymal progenitors. Journal of Biological Chemistry, 2003. 278(46): p. 45969-45977.
[174] Ichida, F., et al., Reciprocal roles of Msx2 in regulation of osteoblast and adipocyte differentiation. Journal of Biological Chemistry, 2004. 279(32): p. 34015-34022.
[175] Yoshizawa, T., et al., Homeobox protein Msx2 acts as a molecular defense mechanism for preventing ossification in ligament fibroblasts. Molecular and Cellular Biology, 2004. 24(8): p. 3460-3472.
[176] Balint, E., et al., Phenotype discovery by gene expression profiling: Mapping of biological processes linked to BMP-2-mediated osteoblast differentiation. Journal of Cellular Biochemistry, 2003. 89(2): p. 401-426.
[177] Shirakabe, K., et al., Regulation of the activity of the transcription factor Runx2 by two homeobox proteins, Msx2 and Dlx5. Genes to Cells, 2001. 6(10): p. 851-856.
[178] Hassan, M.Q.e.a., hoxa10: a BMP-2-responsive gene activates runx2 and regulates osteogenesis. Journal of Bone and Mineral Research, 2005. 20(9): p. S5-S5.
[179] Lee, M.H., et al., Dlx5 specifically regulates Runx2 type II expression by binding to homeodomain-response elements in the Runx2 distal promoter. Journal of Biological Chemistry, 2005. 280(42): p. 35579-35587.
[180] Nakashima, K., et al., The novel zinc finger-containing transcription factor Osterix is required for osteoblast differentiation and bone formation. Cell, 2002. 108(1): p. 17-29.
[181] Pratap, J., et al., Cell growth regulatory role of Runx2 during proliferative expansion of preosteoblasts. Cancer Research, 2003. 63(17): p. 5357-5362.
[182] Kim, Y.J., et al., The bone-related Zn finger transcription factor Osterix promotes proliferation of mesenchymal cells. Gene, 2006. 366(1): p. 145-151.
[183] Selvamurugan, N., et al., Parathyroid hormone regulates the rat collagenase-3 promoter in osteoblastic cells through the cooperative interaction of the activator protein-1 site and the runt domain binding sequence. Journal of Biological Chemistry, 1998. 273(17): p. 10647-10657.
[184] McCarthy, T.L., et al., Runt domain factor (Runx)-dependent effects on CCAAT/ enhancer-binding protein delta expression and activity in osteoblasts. J Biol Chem, 2000. 275(28): p. 21746-53.
[185] Gutierrez, S., et al., CCAAT/enhancer-binding proteins (C/EBP) beta and delta activate osteocalcin gene transcription and synergize with Runx2 at the C/EBP element to regulate bone-specific expression. Journal of Biological Chemistry, 2002. 277(2): p. 1316-1323.
[186] Xiao, G.Z., et al., Cooperative interactions between activating transcription factor 4 and Runx2/Cbfa1 stimulate osteoblast-specific osteocalcin gene expression. Journal of Biological Chemistry, 2005. 280(35): p. 30689-30696.
[187] Yang, X.G., et al., ATF4 is a substrate of RSK2 and an essential regulator of osteoblast biology: Implication for Coffin-Lowry syndrome. Cell, 2004. 117(3): p. 387-398.
[188] Otto, F., et al., Cbfa1, a candidate gene for cleidocranial dysplasia syndrome, is essential for osteoblast differentiation and bone development. Cell, 1997. 89(5): p. 765-771.
[189] Komori, T., Regulation of osteoblast differentiation by transcription factors. Journal of Cellular Biochemistry, 2006. 99(5): p. 1233-1239.
[190] Puchacz, E., et al., Chromosomal localization of the human osteocalcin gene. Endocrinology, 1989. 124(5): p. 2648-50.
[191] Cancela, L., et al., Molecular-structure, chromosome assignment, and promoter organization of the human matrix gla protein gene. Journal of Biological Chemistry, 1990. 265(25): p. 15040-15048.
[192] Lee, N.K., et al., Endocrine regulation of energy metabolism by the skeleton. Cell, 2007. 130(3): p. 456-469.
[193] Nomura, S., et al., Developmental expression of 2ar (osteopontin) and SPARC (osteonectin) RNA as revealed by in situ hybridization. J Cell Biol, 1988. 106(2): p. 441-50.
[194] Johansson C., The Structural Organization of Type IV Collagen. The journal of Biological Chemistry, 1992. 267(34): p. 24533-24537.
[195] Ashizawa, N., et al., Osteopontin is produced by rat cardiac fibroblasts and mediates A(II)-induced DNA synthesis and collagen gel contraction. Journal of Clinical Investigation, 1996. 98(10): p. 2218-2227.
[196] Murry, C.E., et al., MACROPHAGES EXPRESS OSTEOPONTIN DURING REPAIR OF MYOCARDIAL NECROSIS. American Journal of Pathology, 1994. 145(6): p. 1450-1462.
[197] Lkeda, T., et al., Osteopontin mRNA is expressed by smooth muscle-derived foam cells in human atherosclerotic lesions of the aorta. J Clin Invest 1993. 92(6): p. 2814-20.
[198] Uaesoontrachoon, K., et al., Osteopontin and skeletal muscle myoblasts: Association with muscle regeneration and regulation of myoblast function in vitro. International Journal of Biochemistry & Cell Biology, 2008. 40(10): p. 2303-2314.
[199] Merry, K., et al., Expression of osteopontin mRNA by osteoclasts and osteoblasts in modelling adult human bone. J Cell Sci, 1993. 104(Pt 4): p. 1013-20.
[200] Choi, S.T., et al., Osteopontin might be involved in bone remodelling rather than in inflammation in ankylosing spondylitis. Rheumatology, 2008. 47(12): p. 1775-1779.
[201] Reinholt, F.P., et al., Osteopontin - a possible anchor of osteoclasts to bone. Proceedings of the National Academy of Sciences of the United States of America, 1990. 87(12): p. 4473-4475.
[202] Solloway, M.J., et al., Molecular pathways in myocardial development: a stem cell perspective. Cardiovascular Research, 2003. 58(2): p. 264-77.
[203] Olson, E.N., et al., Molecular pathways controlling heart development. Science, 1996. 272(5262): p. 671-6.
[204] Arabadjiev, A., et al., We heart cultured hearts. A comparative review of methodologies for targeted differentiation and maintenance of cardiomyocytes derived from pluripotent and multipotent stem cells. BioDiscovery, 2014. 14(2)
[205] Smits, A.M., et al., Human cardiomyocyte progenitor cells differentiate into functional mature cardiomyocytes: an in vitro model for studying human cardiac physiology and pathophysiology. Nat Protoc., 2009. 4(2): p. 232-43.
[206] Fukuda. K., et al., Cardiomyocytes can be generated from marrow stromal cells in vitro. J. Clin. Invest., 1999. 103: p. 697-705.
[207] Shi S.T., et al., Differentiation of Bone Marrow Mesenchymal Stem Cells to Cardiomyocyte-Like Cells Is Regulated by the Combined Low Dose Treatment of Transforming Growth Factor-β1 and 5-Azacytidine. Stem Cells International, 2016. Article ID 3816256.
[208] Joupari M.D., et al., Effects of 5-Azacytidine on Differentiation of Ovine Mesenchymal Stem Cells. Int J Stem Cell Res Transplant., 2015. 03(2): p. 96-100.
[209] Martin-Rendon, E., et al., 5-Azacytidine-treated human mesenchymal stem/progenitor cells derived from umbilical cord, cord blood and bone marrow do not generate cardiomyocytes in vitro at high frequencies. Vox Sanguinis, 2008. 95(2): p. 137-148.
[210] Wang, H.Y., et al., Isolation and Characterization of Porcine Amniotic Fluid-Derived Multipotent Stem Cells. PLoS ONE, 2011. 6(5): e19964.
[211] Planat-Bénard, V., et al., Spontaneous Cardiomyocyte Differentiation From Adipose Tissue Stroma Cells. Circ Res., 2004. 94(2): p. 223-229.
[212] Okamoto, K., et al., ‘Working′ cardiomyocytes exhibiting plateau action potentials fromhumanplacenta-derived extraembryonic mesodermal cells. Experimental Cell Research, 2007. 313(12): p. 2550-2562.
[213] Xu, W.R., et al., Mesenchymal Stem Cells from Adult Human Bone Marrow Differentiate into a Cardiomyocyte Phenotype In Vitro. Experimental Biology and Medicine, 2004. 229(7): p. 623-31.
[214] Dimmeler, S., et al., Transdifferentiation of Blood-Derived Human Adult Endothelial Progenitor Cells Into Functionally Active Cardiomyocytes. Circulation, 2003. 107: p. 1024-1032.
[215] Pittenger, M.F., et al., Human Mesenchymal Stem Cells Differentiate to a Cardiomyocyte Phenotype in the Adult Murine Heart. Circulation, 2002.105: p. 93-98.
[216] Jacot, J.G., et al., Amniotic fluid-derived stem cells demonstrate limited cardiac differentiation following small molecule-based modulation of Wnt signaling pathway. Biomed. Mater., 2015. 10: 034103.
[217] Ravens, U., et al., 5-Azacytidine induces changes in electrophysiological properties of human mesenchymal stem cells. Cell Research, 2006. 16: p. 949-960.
[218] Kuo, S.M., et al., Hydrolyzed 5-Azacytidine Enhances Differentiation of Rat Mesenchymal Stem Cells into Cardiomyocytes. J. Med. Biol. Eng., 2015. 35: p. 473–481.
[219] Miaoli, M., et al., Amniotic fluid stem cells morph into a cardiovascular lineage: analysis of a chemically induced cardiac and vascular commitment. Drug Design, Development and Therapy, 2013. 7: p. 1063–1073.
[220] Mohanty, S., et al., TGFβ1 contributes to cardiomyogenic-like differentiation of human bone marrow mesenchymal stem cells. International Journal of Cardiology, 2013. 163(1): p. 93–99.
[221] Nikaido, T., et al., Human Amniotic Mesenchymal Cells Have Some Characteristics of Cardiomyocytes. Transplantation, 2005. 79: p. 528–535.
[222] Kim, B.S., et al., In vitro cardiomyogenic differentiation of adipose-derived stromal cells using transforming growth factor-b1. Cell Biochem Funct, 2009. 27: p. 148–154.
[223] Antonitsis, P., et al., In vitro cardiomyogenic differentiation of adult human bone marrow mesenchymal stem cells. The role of 5-azacytidine. Interactive CardioVascular and Thoracic Surgery, 2007. 6: p. 593–597.
[224] Guan, X., et al., In Vitro Cardiomyogenic Potential of Human Amniotic Fluid Stem Cells. J Tissue Eng Regen Med., 2011. 5(3): p. 220–228.
[225] Goumans, M.J., et al., TGF-beta1 induces efficient differentiation of human cardiomyocyte progenitor cells into functional cardiomyocytes in vitro. Stem Cell Res., 2007. 1: p. 138-49.
[226] Matsuura, K., et al., Adult cardiac Sca-1-positive cells differentiate into beating cardiomyocytes. J Biol Chem., 2004. 279(11): p. 384-91.
[227] Wang, H.S., et al., Mesenchymal stem cells in the Wharton′s jelly of the human umbilical cord. Stem Cells, 2004. 22: p. 1330-7.
[228] Wu, K.H., et al., Cardiac potential of stem cells from whole human umbilical cord tissue. J Cell Biochem., 2009. 107: p. 926-32.
[229] Jacot, J. G., et al., Amniotic fluid-derived stem cells demonstrated cardiogenic potential in indirect co-culture with human cardiac cells, Ann Biomed Eng., 2014. 42(12): p. 2490–2500.
[230] Yeh, Y. C., et al., Cellular Cardiomyoplasty with Human Amniotic Fluid Stem Cells: In Vitro and In Vivo Studies. Tissue Engineering: Part A, 2010. 16.
[231] Bollini, S., et al., In Vitro and In Vivo Cardiomyogenic Differentiation of Amniotic Fluid Stem Cells. Stem Cell Rev and Rep, 2011. 7: p. 364–380.
[232] Chua, K. H., et al., 5-Azacytidine Is Insufficient For Cardiogenesis In Human Adipose-Derived Stem Cells. Journal of Negative Results in BioMedicine, 2012. 11(3).
[233] Dou, Z. Y., et al., Effect of 5-azacytidine induction duration on differentiation of human first-trimester fetal mesenchymal stem cells towards cardiomyocyte-like cells. Interactive CardioVascular and Thoracic Surgery, 2009. 9: p. 943–946.
[234] Casteilla L., et al., Spontaneous Cardiomyocyte Differentiation From Adipose Tissue Stroma Cells. Circ Res., 2004. 94: p. 223-229.
[235] Chen, C.F., et al., Real-time quantification of microRNAs by stem-loop RT-PCR. Nucleic Acids Research, 2005. 33(20).
[236] Niesters, H.G.M., Quantitation of viral load using real-time amplification techniques. Methods, 2001. 25(4): p. 419-429.
[237] Livak, K.J. and T.D. Schmittgen, Analysis of relative gene expression data using real-time quantitative PCR and the 2(T) (-Delta Delta C) method. Methods, 2001. 25(4): p. 402-408.
[238] Schmittgen, T.D. and K.J. Livak, Analyzing real-time PCR data by the comparative C-T method. Nature Protocols, 2008. 3(6): p. 1101-1108.) |