參考文獻 |
[1] Abkenar, Masoud, Kristian Marx, Thorsten Auth, and Gerhard Gompper. 2013.“Collective behavior of penetrable self-propelled rods in two dimensions.” Physical Review E - Statistical, Nonlinear, and Soft Matter Physics 88 (6): 1–11. https: //doi.org/10.1103/PhysRevE.88.062314.
[2] Balagam, Rajesh, and Oleg A. Igoshin. 2015. “Mechanism for Collective Cell Alignment in Myxococcus xanthus Bacteria.” PLoS Computational Biology 11 (8): 1–20. https://doi.org/10.1371/journal.pcbi.1004474.
[3] Bialek, William, Andrea Cavagna, Irene Giardina, Thierry Mora, Edmondo Silvestri, Massimiliano Viale, and Aleksandra M Walczak. 2012. “Statistical mechanics for natural flocks of birds.” Proceedings of the National Academy of Sciences 109 (13). National Academy of Sciences: 4786–91. https://doi.org/10.1073/pnas.1118633109.
[4]Bricard, Antoine, Jean-Baptiste Caussin, Nicolas Desreumaux, Olivier Dauchot, and Denis Bartolo. 2013. “Emergence of macroscopic directed motion in populations of motile colloids.” Nature 503 (November). Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved.: 95. http://dx.doi.org/10.1038/nature12673 http://10.0.4.14/nature12673 https://www.nature.com/articles/nature12673{#}supplementary-information.
[5] Doi, M., and S. F. Edwards. 1988. The Theory of Polymer Dynamics (International Series of Monographs on Physics). Clarendon Press. https://www.amazon.com/Polymer-Dynamics-International-Monographs-Physics/dp/0198520336?SubscriptionId=0JYN1NVW651KCA56C102&tag=techkie-20&linkCode=xm2&camp=2025&creative=165953&creativeASIN=0198520336.
[6] Dombrowski, Christopher, Luis Cisneros, Sunita Chatkaew, Raymond E Goldstein, and John O Kessler. 2004. “Self-Concentration and Large-Scale Coherencein Bacterial Dynamics.” Phys. Rev. Lett. 93 (9). American Physical Society:98103. https://doi.org/10.1103/PhysRevLett.93.098103.
[6] Elgeti, J., R. G. Winkler, and G. Gompper. 2015. “Physics of microswimmers Single particle motion and collective behavior: A review.” Reports on Progressin Physics 78 (5). IOP Publishing. https://doi.org/10.1088/0034-4885/78/5/056601.
[7] Farrell, F D C, M C Marchetti, D Marenduzzo, and J Tailleur. 2012. “PatternFormation in Self-Propelled Particles with Density-Dependent Motility.” Physical Review Letters 108 (24). American Physical Society: 248101. http://link.aps.org/doi/10.1103/PhysRevLett.108.248101.
[8] Gautrais, Jacques, Francesco Ginelli, Richard Fournier, Stéphane Blanco, MarcSoria, Hugues Chaté, and Guy Theraulaz. 2012. “Deciphering Interactions in Moving Animal Groups.” PLOS Computational Biology 8 (9). Public Library of Science: 1–11. https://doi.org/10.1371/journal.pcbi.1002678.
[9] Griebel, Michael, Stephan Knapek, and Gerhard Zumbusch. 2010. Numerical Simulation in Molecular Dynamics: Numerics, Algorithms, Parallelization, Applications (Texts in Computational Science and Engineering). Springer. https://www.amazon.com/Numerical-Simulation-Molecular-Dynamics Parallelization/dp/3642087760?SubscriptionId=0JYN1NVW651KCA56C102&tag=techkie-20&linkCode=xm2&camp=2025&creative=165953&creativeASIN=3642087760.
[10] Isele-Holder, Rolf E., Jens Elgeti, and Gerhard Gompper. 2015. “Self-propelled Worm-like Filaments: Spontaneous Spiral Formation, Structure, and Dynamics.” Soft Matter 11. Royal Society of Chemistry: 7181–90. https://doi.org/10.1039/C5SM01683E.
[11] Lin, Szu-Ning, Wei-Chang Lo, and Chien-Jung Lo. 2014. “Dynamics of self-organized rotating spiral-coils in bacterial swarms.” Soft Matter 10 (5): 760–66. https://doi.org/10.1039/c3sm52120f.
[12] Mora, Thierry, and William Bialek. 2011. “Are Biological Systems Poised at Criticality?” Journal of Statistical Physics 144 (2): 268–302. https://doi.org/10.1007/s10955-011-0229-4.
[13] Peruani, Fernando, and Markus Bär. 2013. “A kinetic model and scaling properties of non-equilibrium clustering of self-propelled particles.” New Journal of Physics 15. https://doi.org/10.1088/1367-2630/15/6/065009.
[14] Peruani, Fernando, Andreas Deutsch, and Markus Bär. 2006. “Nonequilibrium clustering of self-propelled rods.” Physical Review E - Statistical, Nonlinear, and Soft Matter Physics 74 (3): 1–4. https://doi.org/10.1103/PhysRevE.74.030904.
[15] Peruani, Fernando, J??rn Starru??, Vladimir Jakovljevic, Lotte S??gaard-Andersen, Andreas Deutsch, and Markus B??r. 2012. “Collective motion and nonequilibrium cluster formation in colonies of gliding bacteria.” Physical Review Letters 108 (9): 1–5. https://doi.org/10.1103/PhysRevLett.108.098102.
[16] Riedel, Ingmar H, Karsten Kruse, and Jonathon Howard. 2005. “A Self-Organized Vortex Array of Hydrodynamically Entrained Sperm Cells.” Science 309 (5732). American Association for the Advancement of Science: 300–303. https://doi.org/10.1126/science.1110329.
[17] Starruss, J., F. Peruani, V. Jakovljevic, L. Sogaard-Andersen, A. Deutsch, and M. Bar. 2012. “Pattern-formation mechanisms in motility mutants of Myxococcus xanthus.” Interface Focus 2 (6): 774–78 5. https://doi.org/10.1098/rsfs.2012. 0034.
[18] Sumino, Yutaka, Ken H. Nagai, Yuji Shitaka, Dan Tanaka, Kenichi Yoshikawa, Hugues Chaté, and Kazuhiro Oiwa. 2012. “Large-scale vortex lattice emerging from collectively moving microtubules.” Nature 483 (7390): 448–52. https://doi.org/10.1038/nature10874.
[19] Tavaddod, S., M. a. Charsooghi, F. Abdi, H. R. Khalesifard, and R. Golestanian. 2011. “Probing passive diffusion of flagellated and deflagellated Escherichia coli.” European Physical Journal E 34 (2): 1–7. https://doi.org/10.1140/epje/i2011-11016-9.
[20] Vicsek, Tamás, András Czirók, Eshel Ben-Jacob, Inon Cohen, and Ofer Shochet. 1995. “Novel Type of Phase Transition in a System of Self-Driven Particles.” Phys. Rev. Lett. 75 (6). American Physical Society: 1226–9. https://doi.org/10.1103/PhysRevLett.75.1226.
[21] Wensink, Henricus H., Julia M. Yeomans, Raymond E. Goldstein, J. Dunkel,S. Heidenreich, K. Drescher, Raymond E. Goldstein, H. Lowen, and Julia M. Yeomans. 2012. “Meso-scale turbulence in living fluids.” Proceedings of the National Academy of Sciences 109 (36): 14308–13. https://doi.org/10.1073/pnas. 1202032109. |